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  5. Pp1s29_139V6

Pp1s29_139V6


Description : splicing factorsubunit 2


Gene families : OG_42_0005802 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005802_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s29_139V6
Cluster HCCA clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
Bradi1g67320 No alias hydroxyproline-rich glycoprotein family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0071821 FANCM-MHF complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR031781 SF3A2_dom 110 204
No external refs found!