1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s29_19V6

Pp1s29_19V6


Description : FCAALL.424; DEAD/DEAH box helicase, putative (RH28) [Arabidopsis thaliana]


Gene families : OG_42_0007352 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007352_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s29_19V6
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Bradi4g07397 No alias DEA(D/H)-box RNA helicase family protein 0.02 Orthogroups_2024-Update
Cre10.g420900 No alias DEA(D/H)-box RNA helicase family protein 0.02 Orthogroups_2024-Update
GRMZM5G804064 No alias DEA(D/H)-box RNA helicase family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G093160.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os12g29660 No alias DEAD-box ATP-dependent RNA helicase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.005G241300 No alias DEA(D/H)-box RNA helicase family protein 0.02 Orthogroups_2024-Update
Seita.3G322400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g081580 No alias RNA helicase DEAD15 0.02 Orthogroups_2024-Update
evm.model.contig_601.5 No alias (at4g16630 : 453.0) DEA(D/H)-box RNA helicase family... 0.02 Orthogroups_2024-Update
evm.model.tig00000792.35 No alias (at4g16630 : 441.0) DEA(D/H)-box RNA helicase family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006177 GMP biosynthetic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009163 nucleoside biosynthetic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0042451 purine nucleoside biosynthetic process IEP Predicted GO
BP GO:0042455 ribonucleoside biosynthetic process IEP Predicted GO
BP GO:0046037 GMP metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901070 guanosine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901659 glycosyl compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 427 535
IPR011545 DEAD/DEAH_box_helicase_dom 219 388
No external refs found!