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  5. Pp1s29_213V6

Pp1s29_213V6


Description : F16M14.7; chloroplast 30S ribosomal protein S31 (PSRP4) [Arabidopsis thaliana]


Gene families : OG_42_0003423 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s29_213V6
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Bradi1g38630 No alias plastid-specific ribosomal protein 4 0.05 Orthogroups_2024-Update
Brara.E00706.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Glyma.03G063200 No alias plastid-specific ribosomal protein 4 0.02 Orthogroups_2024-Update
HORVU7Hr1G079190.2 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.02 Orthogroups_2024-Update
Kfl00060_0270 kfl00060_0270_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os05g09400 No alias 30S ribosomal protein S31, chloroplast precursor,... 0.03 Orthogroups_2024-Update
Potri.016G113700 No alias plastid-specific ribosomal protein 4 0.05 Orthogroups_2024-Update
Seita.4G218100.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Sobic.003G393800.1 No alias component *(bTHXc) of small plastid ribosomal-subunit proteome 0.03 Orthogroups_2024-Update
Solyc05g052710 No alias 30S ribosomal protein S31 (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen05g031230 No alias hypothetical protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR030826 Ribo_THX 7 87
No external refs found!