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  5. Pp1s2_312V6

Pp1s2_312V6


Description : dna binding


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s2_312V6
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14480 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B03508.1 No alias GARP subgroup PHL transcription factor & transcription... 0.02 Orthogroups_2024-Update
Brara.F03679.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G056400 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G108500 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G282900 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G068320.2 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G109130.1 No alias GARP subgroup PHL transcription factor & regulatory... 0.03 Orthogroups_2024-Update
Pp1s12_158V6 No alias MUJ8.2; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s68_248V6 No alias myb transcription factor 0.03 Orthogroups_2024-Update
Solyc06g066340 No alias Myb family transcription factor family protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc09g005030 No alias Homeodomain-like superfamily protein (AHRD V3.3 *-* AT2G40260.1) 0.02 Orthogroups_2024-Update
Sopen05g034340 No alias MYB-CC type transfactor, LHEQLE motif 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 33 83
No external refs found!