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  5. Pp1s2_335V6

Pp1s2_335V6


Description : oligopeptide transporter opt family


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s2_335V6
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
A4A49_27452 No alias metal-nicotianamine transporter ysl3 0.03 Orthogroups_2024-Update
Bradi5g17230 No alias YELLOW STRIPE like 2 0.02 Orthogroups_2024-Update
Brara.F02656.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Brara.H01665.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Brara.I00272.1 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
Glyma.09G164500 No alias YELLOW STRIPE like 7 0.03 Orthogroups_2024-Update
HORVU6Hr1G059420.2 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
MA_10429029g0010 No alias (at5g53550 : 696.0) YELLOW STRIPE like 3 (YSL3);... 0.02 Orthogroups_2024-Update
Mp4g01710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Orthogroups_2024-Update
PSME_00004864-RA No alias (at1g65730 : 904.0) Arabidopsis thaliana... 0.01 Orthogroups_2024-Update
PSME_00016946-RA No alias (at1g65730 : 860.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00019280-RA No alias (at5g53550 : 798.0) YELLOW STRIPE like 3 (YSL3);... 0.02 Orthogroups_2024-Update
PSME_00036873-RA No alias (at1g65730 : 901.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00044922-RA No alias (at1g65730 : 907.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.017G151600 No alias YELLOW STRIPE like 7 0.02 Orthogroups_2024-Update
Potri.017G151800 No alias YELLOW STRIPE like 7 0.02 Orthogroups_2024-Update
Seita.1G244400.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Seita.1G254200.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Seita.7G075900.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Seita.7G172900.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Sobic.006G164300.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Solyc03g031920 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9SIR4_RICCO) 0.03 Orthogroups_2024-Update
Solyc03g082620 No alias Yellow stripe 1A transporter (AHRD V3.3 *** A0A0K9P9K5_ZOSMR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 78 696
No external refs found!