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Pp1s2_451V6


Description : superoxide dismutase


Gene families : OG_42_0002254 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002254_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s2_451V6
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Bradi1g50550 No alias Fe superoxide dismutase 2 0.03 Orthogroups_2024-Update
Bradi1g51140 No alias Fe superoxide dismutase 3 0.05 Orthogroups_2024-Update
Brara.I00624.1 No alias cofactor of plastid-encoded RNA polymerase *(PAP4/FSD3)... 0.03 Orthogroups_2024-Update
Solyc03g095180 No alias Superoxide dismutase (AHRD V3.3 *** Q7YK44_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA InterProScan predictions
BP GO:0006801 superoxide metabolic process IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 68 153
IPR019832 Mn/Fe_SOD_C 160 262
No external refs found!