Pp1s2_784V6

Description : rna exonuclease

Gene families : OG_42_0005654 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005654_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s2_784V6
Cluster	HCCA clusters: Cluster_209

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sopen04g026510	No alias	Exonuclease	0.03	Orthogroups_2024-Update
evm.model.tig00000692.75	No alias	(at5g25800 : 114.0) Polynucleotidyl transferase,...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Predicted GO
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006897	endocytosis	IEP	Predicted GO
BP	GO:0009451	RNA modification	IEP	Predicted GO
MF	GO:0009982	pseudouridine synthase activity	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
BP	GO:0018193	peptidyl-amino acid modification	IEP	Predicted GO
BP	GO:0018208	peptidyl-proline modification	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
BP	GO:0098657	import into cell	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013520	Exonuclease_RNaseT/DNA_pol3	271	419

External Links

No external refs found!