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  5. Pp1s2_790V6

Pp1s2_790V6


Description : pectate lyase


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s2_790V6
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G002880.2 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.01 Orthogroups_2024-Update
Potri.003G175900 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G229000 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002022 Pec_lyase 219 402
No external refs found!