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  5. Pp1s302_51V6

Pp1s302_51V6


Description : soluble starch synthase iv-1


Gene families : OG_42_0001050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s302_51V6
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G203650 No alias UDP-Glycosyltransferase superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os04g53310 No alias soluble starch synthase 3, chloroplast precursor,... 0.01 Orthogroups_2024-Update
Mp2g08030.1 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.01 Orthogroups_2024-Update
Pp1s2_195V6 No alias soluble starch synthase iv-2 0.03 Orthogroups_2024-Update
Solyc02g080570 No alias Soluble starch synthase 3, chloroplastic/amyloplastic... 0.02 Orthogroups_2024-Update
Sopen02g025270 No alias Carbohydrate binding domain (family 25) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 103 342
IPR001296 Glyco_trans_1 396 572
No external refs found!