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  5. Pp1s306_67V6

Pp1s306_67V6


Description : F17L21.13; F-box family protein [Arabidopsis thaliana]


Gene families : OG_42_0001085 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s306_67V6
Cluster HCCA clusters: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
MA_132560g0010 No alias (at5g15710 : 81.6) Galactose oxidase/kelch repeat... 0.02 Orthogroups_2024-Update
MA_19554g0010 No alias (at5g15710 : 93.6) Galactose oxidase/kelch repeat... 0.02 Orthogroups_2024-Update
MA_2646g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_54640g0010 No alias (at5g15710 : 103.0) Galactose oxidase/kelch repeat... 0.02 Orthogroups_2024-Update
MA_736230g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00037301-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Pp1s298_61V6 No alias F14F8.90; F-box protein family [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s304_40V6 No alias UNUSUAL FLORAL ORGANS protein (F-box only protein 1)... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 8 50
No external refs found!