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  5. Pp1s30_141V6

Pp1s30_141V6


Description : F5N5.17; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0000147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s30_141V6
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
Brara.C01976.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.02G091500 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update
HORVU3Hr1G115940.1 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os01g65740 No alias plant-specific domain TIGR01615 family protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g25040 No alias plant-specific domain TIGR01615 family protein, expressed 0.02 Orthogroups_2024-Update
PSME_00044444-RA No alias (at2g39650 : 170.0) Protein of unknown function (DUF506)... 0.02 Orthogroups_2024-Update
Pp1s192_53V6 No alias F17A14.2; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Solyc06g083160 No alias LOW QUALITY:DUF506 family protein (AHRD V3.3 *** G7LF52_MEDTR) 0.02 Orthogroups_2024-Update
Sopen11g006910 No alias Protein of unknown function (DUF506) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004371 glycerone kinase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 120 335
No external refs found!