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  5. Solyc11g066020

Solyc11g066020


Description : Ankyrin repeat family protein (AHRD V3.3 *** B9GJP4_POPTR)


Gene families : OG_42_0001761 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g066020
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
A4A49_10718 No alias putative e3 ubiquitin-protein ligase xbat31 0.02 Orthogroups_2024-Update
At2g28840 No alias Putative E3 ubiquitin-protein ligase XBAT31... 0.03 Orthogroups_2024-Update
Bradi1g66640 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.02 Orthogroups_2024-Update
Bradi2g37100 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.01 Orthogroups_2024-Update
Bradi2g62400 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.01 Orthogroups_2024-Update
Brara.C02396.1 No alias E3 ubiquitin ligase *(XBAT3) 0.02 Orthogroups_2024-Update
GRMZM2G103270 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.03 Orthogroups_2024-Update
GRMZM2G113002 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.04 Orthogroups_2024-Update
Glyma.13G335300 No alias XB3 ortholog 1 in Arabidopsis thaliana 0.03 Orthogroups_2024-Update
HORVU3Hr1G116350.2 No alias E3 ubiquitin ligase *(XBAT3) 0.04 Orthogroups_2024-Update
Seita.9G452800.1 No alias E3 ubiquitin ligase *(XBAT3) 0.03 Orthogroups_2024-Update
Sopen11g025760 No alias Ankyrin repeats (3 copies) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0005342 organic acid transmembrane transporter activity IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0015171 amino acid transmembrane transporter activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 195 225
IPR020683 Ankyrin_rpt-contain_dom 15 108
IPR020683 Ankyrin_rpt-contain_dom 110 183
No external refs found!