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  5. Pp1s313_58V6

Pp1s313_58V6


Description : beta-expansin 3


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s313_58V6
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
171427 No alias expansin B3 0.03 Orthogroups_2024-Update
A4A49_57799 No alias putative expansin-b2 0.02 Orthogroups_2024-Update
At1g65680 No alias Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6] 0.02 Orthogroups_2024-Update
Bradi1g78350 No alias expansin B2 0.04 Orthogroups_2024-Update
Bradi3g33130 No alias expansin B2 0.02 Orthogroups_2024-Update
Brara.E00483.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G00015.1 No alias beta-class expansin 0.02 Orthogroups_2024-Update
GRMZM2G059785 No alias expansin B2 0.02 Orthogroups_2024-Update
GRMZM2G401983 No alias expansin B2 0.02 Orthogroups_2024-Update
Glyma.01G077000 No alias expansin B2 0.02 Orthogroups_2024-Update
Glyma.11G166546 No alias expansin B2 0.03 Orthogroups_2024-Update
HORVU4Hr1G088080.4 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G092910.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g44108 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427897g0010 No alias (q7x6j9|exb17_orysa : 304.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
MA_166764g0010 No alias (q7x6j9|exb17_orysa : 194.0) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
MA_78155g0010 No alias (q7x6j9|exb17_orysa : 256.0) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
PSME_00003968-RA No alias (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00008080-RA No alias (q7x6j9|exb17_orysa : 305.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00009595-RA No alias (q7x6j9|exb17_orysa : 96.7) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
PSME_00015392-RA No alias (at2g20750 : 239.0) member of BETA-EXPANSINS. Naming... 0.02 Orthogroups_2024-Update
PSME_00024925-RA No alias (q7x6j9|exb17_orysa : 300.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00039752-RA No alias (q7x6j9|exb17_orysa : 251.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
PSME_00048195-RA No alias (q7xt40|exb15_orysa : 117.0) Expansin-B15 precursor... 0.02 Orthogroups_2024-Update
Potri.019G101900 No alias expansin B3 0.02 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.06 Orthogroups_2024-Update
Seita.2G122700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G122800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G327000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G300800.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G301600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 167 251
IPR009009 RlpA-like_DPBB 74 141
No external refs found!