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  5. Solyc11g066350

Solyc11g066350


Description : Shugoshin-1, putative (AHRD V3.3 *** B9SCJ5_RICCO)


Gene families : OG_42_0003509 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003509_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g066350
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At3g44960 No alias Shugoshin [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT08] 0.05 Orthogroups_2024-Update
At5g04320 No alias SHUGOSHIN 2 [Source:UniProtKB/Swiss-Prot;Acc:Q0WTB8] 0.04 Orthogroups_2024-Update
Glyma.10G196400 No alias Shugoshin C terminus 0.19 Orthogroups_2024-Update
Glyma.11G193300 No alias Shugoshin C terminus 0.04 Orthogroups_2024-Update
Glyma.12G080700 No alias Shugoshin C terminus 0.22 Orthogroups_2024-Update
Glyma.20G193800 No alias Shugoshin C terminus 0.05 Orthogroups_2024-Update
Potri.008G032600 No alias Shugoshin C terminus 0.03 Orthogroups_2024-Update
Potri.009G006100 No alias Shugoshin C terminus 0.1 Orthogroups_2024-Update
Sopen11g026100 No alias Shugoshin C terminus 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0045132 meiotic chromosome segregation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011515 Shugoshin_C 272 296
No external refs found!