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  5. Pp1s316_8V6

Pp1s316_8V6


Description : dna binding


Gene families : OG_42_0000707 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s316_8V6
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
A4A49_23871 No alias b3 domain-containing protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G007720.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G012120.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G012170.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G017910.14 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g42240 No alias B3 DNA binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.014G036900 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
Pp1s27_190V6 No alias Vitellogenin-2 precursor (Vitellogenin II) (Major... 0.02 Orthogroups_2024-Update
Seita.3G372100.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 42 125
No external refs found!