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  5. Pp1s325_20V6

Pp1s325_20V6


Description : amp dependent


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s325_20V6
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G075333 No alias 4-coumarate:CoA ligase 2 0.02 Orthogroups_2024-Update
Seita.1G065800.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Seita.6G167900.1 No alias p-coumarate 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 482 557
IPR000873 AMP-dep_Synth/Lig 58 469
No external refs found!