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  5. Pp1s326_37V6

Pp1s326_37V6


Description : atmyb16 (myb domain protein 16) dna binding transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s326_37V6
Cluster HCCA clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
A4A49_19591 No alias myb-related protein myb4 0.02 Orthogroups_2024-Update
A4A49_20218 No alias transcription factor myb39 0.02 Orthogroups_2024-Update
At2g26960 No alias Myb domain protein 81 [Source:UniProtKB/TrEMBL;Acc:Q9SLH1] 0.02 Orthogroups_2024-Update
At5g06100 No alias Transcription factor MYB33... 0.03 Orthogroups_2024-Update
At5g49620 No alias myb domain protein 78 [Source:TAIR;Acc:AT5G49620] 0.02 Orthogroups_2024-Update
At5g65790 No alias At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538] 0.03 Orthogroups_2024-Update
Bradi2g05740 No alias myb domain protein 37 0.03 Orthogroups_2024-Update
Bradi3g17165 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Bradi3g56917 No alias myb domain protein 20 0.03 Orthogroups_2024-Update
Brara.A00330.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Brara.B01349.1 No alias MYB class-R2R3 subgroup-18 transcription factor 0.02 Orthogroups_2024-Update
Brara.B01779.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Brara.B03395.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G015021 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
GRMZM2G119693 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.04 Orthogroups_2024-Update
Glyma.01G196200 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.02G247100 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
Glyma.08G191500 No alias myb domain protein 26 0.02 Orthogroups_2024-Update
Glyma.10G014600 No alias myb domain protein 12 0.03 Orthogroups_2024-Update
Glyma.10G165800 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.11G045400 No alias myb domain protein 84 0.02 Orthogroups_2024-Update
Glyma.13G322900 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.18G230600 No alias myb domain protein 17 0.03 Orthogroups_2024-Update
Glyma.19G218800 No alias myb domain protein 2 0.03 Orthogroups_2024-Update
Glyma.19G222200 No alias myb domain protein 55 0.02 Orthogroups_2024-Update
HORVU4Hr1G052490.5 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g07450 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g43680 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g10350 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_101790g0010 No alias (at4g38620 : 241.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
MA_1589g0010 No alias (at1g63910 : 241.0) member of MYB3R- and R2R3- type MYB-... 0.02 Orthogroups_2024-Update
MA_3665g0010 No alias (at5g26660 : 238.0) a MYB gene encodes a transcriptional... 0.03 Orthogroups_2024-Update
MA_37058g0010 No alias (at5g35550 : 158.0) TT2 encodes a R2R3 MYB domain... 0.02 Orthogroups_2024-Update
MA_37851g0010 No alias (at3g08500 : 182.0) Encodes a putative R2R3-type MYB... 0.03 Orthogroups_2024-Update
MA_7261g0010 No alias (at3g12720 : 147.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00009359-RA No alias (at1g22640 : 174.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.02 Orthogroups_2024-Update
PSME_00036696-RA No alias (at5g16770 : 208.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00049306-RA No alias (at5g15310 : 258.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00050445-RA No alias (at5g40350 : 171.0) Myb24 transcription factor. Member... 0.03 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
Potri.001G086700 No alias myb domain protein 111 0.02 Orthogroups_2024-Update
Potri.001G267300 No alias myb domain protein 83 0.02 Orthogroups_2024-Update
Potri.006G275900 No alias myb domain protein 3 0.02 Orthogroups_2024-Update
Potri.008G173400 No alias myb domain protein 79 0.02 Orthogroups_2024-Update
Pp1s2_55V6 No alias myb transcription factor 0.05 Orthogroups_2024-Update
Pp1s2_60V6 No alias myb transcription factor 0.03 Orthogroups_2024-Update
Seita.1G324800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
Seita.2G199900.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.8G006900.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G368500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G358900.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G216900.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Solyc06g074910 No alias potato leaf 0.03 Orthogroups_2024-Update
Solyc09g090130 No alias R2R3MYB transcription factor 15 0.03 Orthogroups_2024-Update
Sopen01g023280 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen05g031660 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen08g027720 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen11g025590 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 113
IPR001005 SANT/Myb 15 62
No external refs found!