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  5. Pp1s326_65V6

Pp1s326_65V6


Description : F17F16.7; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0005535 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005535_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s326_65V6
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
183274 No alias high chlorophyll fluorescence phenotype 173 0.02 Orthogroups_2024-Update
At1g16720 No alias high chlorophyll fluorescence phenotype 173... 0.02 Orthogroups_2024-Update
Bradi1g34525 No alias high chlorophyll fluorescence phenotype 173 0.07 Orthogroups_2024-Update
Brara.F01166.1 No alias protein involved in PS-II assembly *(HCF173) 0.05 Orthogroups_2024-Update
Cre13.g578650 No alias high chlorophyll fluorescence phenotype 173 0.01 Orthogroups_2024-Update
Glyma.07G000500 No alias high chlorophyll fluorescence phenotype 173 0.03 Orthogroups_2024-Update
Glyma.08G226600 No alias high chlorophyll fluorescence phenotype 173 0.09 Orthogroups_2024-Update
HORVU7Hr1G096250.1 No alias protein involved in PS-II assembly *(HCF173) 0.03 Orthogroups_2024-Update
MA_21385g0010 No alias (at1g16720 : 349.0) Encodes HCF173, a protein with weak... 0.03 Orthogroups_2024-Update
Mp3g04800.1 No alias HCF173 protein involved in PS-II assembly 0.07 Orthogroups_2024-Update
PSME_00029313-RA No alias (at1g16720 : 370.0) Encodes HCF173, a protein with weak... 0.03 Orthogroups_2024-Update
Potri.007G003500 No alias high chlorophyll fluorescence phenotype 173 0.02 Orthogroups_2024-Update
Potri.014G000400 No alias high chlorophyll fluorescence phenotype 173 0.04 Orthogroups_2024-Update
Seita.1G093200.1 No alias protein involved in PS-II assembly *(HCF173) 0.03 Orthogroups_2024-Update
Seita.4G271300.1 No alias protein involved in PS-II assembly *(HCF173) 0.03 Orthogroups_2024-Update
Sobic.010G255300.2 No alias protein involved in PS-II assembly *(HCF173) 0.02 Orthogroups_2024-Update
Solyc08g016080 No alias high chlorophyll fluorescence phenotype 173 (AHRD V3.3... 0.07 Orthogroups_2024-Update
Sopen08g006330 No alias NADH(P)-binding 0.05 Orthogroups_2024-Update
evm.model.tig00020830.55 No alias (at1g16720 : 103.0) Encodes HCF173, a protein with weak... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013857 NADH-UbQ_OxRdtase-assoc_prot30 355 454
IPR016040 NAD(P)-bd_dom 518 600
IPR016040 NAD(P)-bd_dom 212 302
No external refs found!