Solyc11g067000

Description : Drug resistance transporter-like ABC domain protein (AHRD V3.3 *** G7L5Z6_MEDTR)

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc11g067000
Cluster	HCCA clusters: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method
415867	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Bradi2g43150	No alias	pleiotropic drug resistance 12	0.03	Orthogroups_2024-Update
LOC_Os02g32690	No alias	pleiotropic drug resistance protein 15, putative, expressed	0.02	Orthogroups_2024-Update
Seita.1G041000.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.5G221500.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sobic.003G215600.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.003G216000.1	No alias	subfamily ABCG transporter	0.06	Orthogroups_2024-Update
Solyc11g007280	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.04	Orthogroups_2024-Update
Solyc12g098210	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR029481	ABC_trans_N	110	165
IPR003439	ABC_transporter-like	191	373
IPR003439	ABC_transporter-like	890	1042
IPR013581	PDR_assoc	744	804
IPR013525	ABC_2_trans	527	739
IPR013525	ABC_2_trans	1187	1399

External Links

No external refs found!