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  5. Pp1s32_16V6

Pp1s32_16V6


Description : ubiquitin fusion protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s32_16V6
Cluster HCCA clusters: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G019600.6 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G020140.6 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Seita.4G253400.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Seita.4G265000.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Solyc11g005650 No alias Ubiquitin family protein (AHRD V3.3 *-* AT4G02890.4) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
InterPro domains Description Start Stop
IPR001975 Ribosomal_L40e 78 127
IPR000626 Ubiquitin_dom 3 74
No external refs found!