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  5. Solyc11g067110

Solyc11g067110


Description : DNA polymerase epsilon catalytic subunit (AHRD V3.3 *-* AT1G08260.2)


Gene families : OG_42_0003443 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g067110
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
PSME_00003464-RA No alias (at1g08260 : 1385.0) Similar to POL2A, DNA polymerase... 0.02 Orthogroups_2024-Update
Sopen11g026820 No alias Domain of unknown function (DUF1744) 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008408 3'-5' exonuclease activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0016149 translation release factor activity, codon specific IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
CC GO:0017053 transcriptional repressor complex IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
CC GO:0070176 DRM complex IEP Predicted GO
CC GO:0090568 nuclear transcriptional repressor complex IEP Predicted GO
CC GO:0090571 RNA polymerase II transcription repressor complex IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 77 402
No external refs found!