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  5. Solyc01g008090

Solyc01g008090


Description : 40S ribosomal protein S27 (AHRD V3.3 *-* M0TJU4_MUSAM)


Gene families : OG_42_0001909 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g008090
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
163947 No alias ribosomal protein S27 0.09 Orthogroups_2024-Update
A4A49_15619 No alias 40s ribosomal protein s27-2 0.19 Orthogroups_2024-Update
At2g45710 No alias 40S ribosomal protein S27-1... 0.1 Orthogroups_2024-Update
Bradi3g43475 No alias ribosomal protein S27 0.15 Orthogroups_2024-Update
Bradi5g08453 No alias ribosomal protein S27 0.19 Orthogroups_2024-Update
Brara.B03416.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.28 Orthogroups_2024-Update
Brara.F03041.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.17 Orthogroups_2024-Update
Brara.G01908.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.18 Orthogroups_2024-Update
Brara.I00365.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Brara.I04203.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.25 Orthogroups_2024-Update
Cre12.g529400 No alias ribosomal protein S27 0.26 Orthogroups_2024-Update
GRMZM2G066222 No alias ribosomal protein S27 0.07 Orthogroups_2024-Update
Glyma.02G067400 No alias ribosomal protein S27 0.03 Orthogroups_2024-Update
Glyma.16G046500 No alias ribosomal protein S27 0.11 Orthogroups_2024-Update
Glyma.19G105700 No alias ribosomal protein S27 0.1 Orthogroups_2024-Update
HORVU4Hr1G014130.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
HORVU4Hr1G074270.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
HORVU7Hr1G112740.4 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
LOC_Os02g27769 No alias 40S ribosomal protein S27, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g27860 No alias 40S ribosomal protein S27, putative, expressed 0.07 Orthogroups_2024-Update
LOC_Os04g32710 No alias 40S ribosomal protein S27, putative, expressed 0.07 Orthogroups_2024-Update
MA_87055g0010 No alias (at3g61110 : 146.0) Arabidopsis ribosomal protein;... 0.11 Orthogroups_2024-Update
Mp5g09510.1 No alias component RPS27 of SSU proteome 0.05 Orthogroups_2024-Update
PSME_00029823-RA No alias (at3g61110 : 146.0) Arabidopsis ribosomal protein;... 0.08 Orthogroups_2024-Update
Potri.003G161200 No alias ribosomal protein S27 0.22 Orthogroups_2024-Update
Potri.006G192900 No alias ribosomal protein S27 0.03 Orthogroups_2024-Update
Pp1s165_39V6 No alias 40s ribosomal protein 0.31 Orthogroups_2024-Update
Pp1s179_13V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s17_304V6 No alias 40s ribosomal protein 0.06 Orthogroups_2024-Update
Pp1s63_161V6 No alias 40s ribosomal protein 0.2 Orthogroups_2024-Update
Pp1s92_45V6 No alias 40s ribosomal protein 0.03 Orthogroups_2024-Update
Seita.1G160500.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.25 Orthogroups_2024-Update
Sobic.001G091801.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.38 Orthogroups_2024-Update
Sobic.004G145801.1 No alias component *(eS27) of small ribosomal-subunit (SSU) proteome 0.27 Orthogroups_2024-Update
Solyc06g068710 No alias 40S ribosomal protein S27 (AHRD V3.3 *** K4C845_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g003640 No alias Ribosomal protein S27 0.37 Orthogroups_2024-Update
evm.model.tig00001299.2 No alias (at5g47930 : 145.0) Zinc-binding ribosomal protein... 0.18 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27e 51 103
No external refs found!