Pp1s338_12V6

Description : multidrug pheromone mdr abc transporter family

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s338_12V6
Cluster	HCCA clusters: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
169182	No alias	ATP binding cassette subfamily B4	0.02	Orthogroups_2024-Update
A4A49_02254	No alias	abc transporter b family member 11	0.02	Orthogroups_2024-Update
A4A49_07249	No alias	abc transporter b family member 19	0.03	Orthogroups_2024-Update
A4A49_25017	No alias	abc transporter b family member 9	0.04	Orthogroups_2024-Update
At1g28010	No alias	ABC transporter B family member 14...	0.03	Orthogroups_2024-Update
At3g62150	No alias	ABC transporter B family member 21...	0.02	Orthogroups_2024-Update
At4g25960	No alias	ABC transporter B family member 2...	0.03	Orthogroups_2024-Update
Bradi1g66290	No alias	P-glycoprotein 20	0.03	Orthogroups_2024-Update
Bradi2g17710	No alias	P-glycoprotein 11	0.03	Orthogroups_2024-Update
Bradi2g47410	No alias	ATP binding cassette subfamily B4	0.02	Orthogroups_2024-Update
Brara.C01848.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.D00408.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Brara.D02245.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.D02299.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Brara.F00715.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Brara.F03055.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Brara.F03154.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Brara.J00114.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Glyma.02G008000	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Glyma.10G137600	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Glyma.19G016700	No alias	ABC transporter family protein	0.03	Orthogroups_2024-Update
Glyma.19G184300	No alias	ATP binding cassette subfamily B1	0.02	Orthogroups_2024-Update
LOC_Os02g46680	No alias	multidrug resistance protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g47500	No alias	MDR-like ABC transporter, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00014276-RA	No alias	(at3g55320 : 2001.0) P-glycoprotein 20 (PGP20);...	0.02	Orthogroups_2024-Update
Potri.002G019600	No alias	P-glycoprotein 13	0.03	Orthogroups_2024-Update
Potri.003G094400	No alias	P-glycoprotein 2	0.04	Orthogroups_2024-Update
Potri.014G113500	No alias	P-glycoprotein 21	0.02	Orthogroups_2024-Update
Potri.017G081100	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
Potri.017G085000	No alias	ABC transporter family protein	0.05	Orthogroups_2024-Update
Potri.018G141400	No alias	ABC transporter family protein	0.06	Orthogroups_2024-Update
Pp1s29_108V6	No alias	multidrug pheromone mdr abc transporter family	0.03	Orthogroups_2024-Update
Pp1s38_321V6	No alias	multidrug pheromone mdr abc transporter family	0.02	Orthogroups_2024-Update
Seita.5G031800.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Seita.5G283000.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Seita.6G060300.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
Solyc03g122070	No alias	ABC transporter B family-like protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc11g067300	No alias	ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR)	0.02	Orthogroups_2024-Update
evm.model.tig00000025.1	No alias	(at2g47000 : 429.0) Multidrug resistance P-glycoprotein...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Predicted GO
MF	GO:0003916	DNA topoisomerase activity	IEP	Predicted GO
MF	GO:0003917	DNA topoisomerase type I activity	IEP	Predicted GO
MF	GO:0004055	argininosuccinate synthase activity	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006265	DNA topological change	IEP	Predicted GO
BP	GO:0006525	arginine metabolic process	IEP	Predicted GO
BP	GO:0006526	arginine biosynthetic process	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
BP	GO:0016053	organic acid biosynthetic process	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:0051276	chromosome organization	IEP	Predicted GO
BP	GO:0071103	DNA conformation change	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	728	990
IPR011527	ABC1_TM_dom	71	344
IPR003439	ABC_transporter-like	414	562
IPR003439	ABC_transporter-like	1059	1206

External Links

No external refs found!

Pp1s338_12V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation