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  5. Pp1s33_275V6

Pp1s33_275V6


Description : F3I17.20; expressed protein [Arabidopsis thaliana]


Gene families : OG_42_0002064 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s33_275V6
Cluster HCCA clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Mp3g12690.1 No alias regulatory factor (SUN3/4/5) nuclear shape determination 0.02 Orthogroups_2024-Update
Seita.5G399900.1 No alias regulatory component *(SUN3/4/5) of ER luminal chaperone complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012919 SUN_dom 468 591
No external refs found!