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  5. Pp1s340_40V6

Pp1s340_40V6


Description : transposon protein mutator sub-class


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s340_40V6
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
At2g30520 No alias Root phototropism protein 2... 0.02 Orthogroups_2024-Update
At5g67440 No alias BTB/POZ domain-containing protein NPY3... 0.02 Orthogroups_2024-Update
GRMZM2G004523 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.02G237100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.14G206100 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
MA_7675g0010 No alias (at5g48800 : 618.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
Potri.014G133500 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Sobic.003G317000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G026600.1 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004357 glutamate-cysteine ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 278 594
IPR000210 BTB/POZ_dom 95 184
No external refs found!