Description : U-box domain-containing family protein (AHRD V3.3 *** B9IIL0_POPTR)
Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc11g068940 | |
Cluster | HCCA clusters: Cluster_302 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_33780 | No alias | e3 ubiquitin-protein ligase pub23 | 0.02 | Orthogroups_2024-Update | |
At3g19380 | No alias | U-box domain-containing protein 25... | 0.03 | Orthogroups_2024-Update | |
Brara.C03388.1 | No alias | E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Brara.D00589.1 | No alias | E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Glyma.02G102900 | No alias | plant U-box 26 | 0.02 | Orthogroups_2024-Update | |
Glyma.02G196301 | No alias | plant U-box 24 | 0.03 | Orthogroups_2024-Update | |
Glyma.03G202600 | No alias | plant U-box 22 | 0.02 | Orthogroups_2024-Update | |
Glyma.12G189000 | No alias | plant U-box 23 | 0.02 | Orthogroups_2024-Update | |
Glyma.18G042100 | No alias | ARM repeat superfamily protein | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g35680 | No alias | U-box domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
PSME_00043995-RA | No alias | (at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS... | 0.02 | Orthogroups_2024-Update | |
PSME_00056761-RA | No alias | (at3g19380 : 247.0) plant U-box 25 (PUB25); FUNCTIONS... | 0.03 | Orthogroups_2024-Update | |
Potri.014G101100 | No alias | plant U-box 23 | 0.02 | Orthogroups_2024-Update | |
Seita.7G104100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.9G293600.1 | No alias | E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.004G169200.1 | No alias | E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Sobic.004G169900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc01g005160 | No alias | Avr9/Cf-9 rapidly elicited protein 1 | 0.04 | Orthogroups_2024-Update | |
Solyc01g007050 | No alias | U-box domain-containing family protein (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
Solyc01g009330 | No alias | U-box domain-containing family protein (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
Sopen11g001970 | No alias | U-box domain | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | InterProScan predictions |
BP | GO:0016567 | protein ubiquitination | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity | IEP | Predicted GO |
MF | GO:0008252 | nucleotidase activity | IEP | Predicted GO |
MF | GO:0008253 | 5'-nucleotidase activity | IEP | Predicted GO |
MF | GO:0008417 | fucosyltransferase activity | IEP | Predicted GO |
BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Predicted GO |
BP | GO:0009264 | deoxyribonucleotide catabolic process | IEP | Predicted GO |
MF | GO:0031127 | alpha-(1,2)-fucosyltransferase activity | IEP | Predicted GO |
BP | GO:0042546 | cell wall biogenesis | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 6 | 80 |
No external refs found! |