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  5. Pp1s34_24V6

Pp1s34_24V6


Description : fiber protein fb2


Gene families : OG_42_0000601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s34_24V6
Cluster HCCA clusters: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G160273 No alias Drought-responsive family protein 0.02 Orthogroups_2024-Update
Glyma.19G213900 No alias Drought-responsive family protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G031970.1 No alias C2H2 subclass Di19 transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G087100.4 No alias C2H2 subclass Di19 transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G114280.1 No alias C2H2 subclass Di19 transcription factor 0.02 Orthogroups_2024-Update
Seita.5G467500.1 No alias C2H2 subclass Di19 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G125900.1 No alias C2H2 subclass Di19 transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR027935 Di19_C 118 222
IPR008598 Di19_Zn_binding_dom 44 96
No external refs found!