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  5. Pp1s34_31V6

Pp1s34_31V6


Description : at1g09210 t12m4_8


Gene families : OG_42_0001219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001219_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s34_31V6
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G074687 No alias calreticulin 1a 0.02 Orthogroups_2024-Update
GRMZM2G358059 No alias calreticulin 1a 0.03 Orthogroups_2024-Update
HORVU5Hr1G116590.1 No alias ER luminal lectin chaperone *(CRT) 0.02 Orthogroups_2024-Update
Seita.3G185800.1 No alias ER luminal lectin chaperone *(CRT) & component *(CRT3)... 0.04 Orthogroups_2024-Update
Seita.5G412600.1 No alias ER luminal lectin chaperone *(CRT) & component *(CRT3)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0005783 endoplasmic reticulum IEA InterProScan predictions
BP GO:0006457 protein folding IEA InterProScan predictions
MF GO:0051082 unfolded protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001580 Calret/calnex 18 252
IPR001580 Calret/calnex 254 327
No external refs found!