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  5. Solyc01g005300

Solyc01g005300


Description : Flavin-binding kelch domain F box protein (AHRD V3.3 *** A0A088AWQ7_SOYBN)


Gene families : OG_42_0002411 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002411_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc01g005300
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
A4A49_16690 No alias adagio protein 3 0.05 Orthogroups_2024-Update
Brara.G00141.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(ADO) 0.05 Orthogroups_2024-Update
GRMZM2G106363 No alias flavin-binding, kelch repeat, f box 1 0.03 Orthogroups_2024-Update
GRMZM2G107945 No alias flavin-binding, kelch repeat, f box 1 0.03 Orthogroups_2024-Update
Glyma.08G046500 No alias flavin-binding, kelch repeat, f box 1 0.05 Orthogroups_2024-Update
HORVU4Hr1G039300.2 No alias substrate adaptor of SCF E3 ubiquitin ligase *(ADO) 0.06 Orthogroups_2024-Update
Sopen01g001320 No alias Galactose oxidase, central domain 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006023 aminoglycan biosynthetic process IEP Predicted GO
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predicted GO
BP GO:0006029 proteoglycan metabolic process IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009100 glycoprotein metabolic process IEP Predicted GO
BP GO:0009101 glycoprotein biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0015012 heparan sulfate proteoglycan biosynthetic process IEP Predicted GO
MF GO:0016149 translation release factor activity, codon specific IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0030166 proteoglycan biosynthetic process IEP Predicted GO
BP GO:0030201 heparan sulfate proteoglycan metabolic process IEP Predicted GO
BP GO:0030203 glycosaminoglycan metabolic process IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 176 214
IPR011498 Kelch_2 494 541
IPR000014 PAS 20 126
No external refs found!