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Pp1s356_40V6


Description : T6C23.11; TCP family transcription factor, putative [Arabidopsis thaliana]


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s356_40V6
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
A4A49_12409 No alias transcription factor tcp8 0.03 Orthogroups_2024-Update
Brara.G03095.1 No alias TCP-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.20G001600 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
PSME_00024629-RA No alias (at2g45680 : 96.7) TCP family transcription factor ;... 0.02 Orthogroups_2024-Update
Pp1s348_6V6 No alias F1P2.170; TCP family transcription factor, putative... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 78 196
No external refs found!