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  5. Solyc11g069460

Solyc11g069460


Description : Double-stranded RNA binding protein, putative (AHRD V3.3 *** B9SVC8_RICCO)


Gene families : OG_42_0000831 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000831_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc11g069460
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
At5g41070 No alias Double-stranded RNA-binding protein 5... 0.05 Orthogroups_2024-Update
Glyma.11G145900 No alias dsRNA-binding protein 2 0.03 Orthogroups_2024-Update
Glyma.19G241100 No alias dsRNA-binding protein 5 0.03 Orthogroups_2024-Update
LOC_Os09g33460 No alias double-stranded RNA binding motif containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10152247g0010 No alias (at2g28380 : 91.7) Encodes a cytoplasmic dsRNA-binding... 0.03 Orthogroups_2024-Update
Potri.013G032400 No alias dsRNA-binding protein 5 0.03 Orthogroups_2024-Update
Potri.013G061500 No alias double-stranded-RNA-binding protein 4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 88 152
IPR014720 dsRBD_dom 2 68
No external refs found!