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  5. Pp1s35_125V6

Pp1s35_125V6


Description : beta chain


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s35_125V6
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_15205 No alias tubulin beta-2 chain 0.02 Orthogroups_2024-Update
A4A49_57434 No alias tubulin beta-8 chain 0.02 Orthogroups_2024-Update
At5g44340 No alias Tubulin beta-4 chain [Source:UniProtKB/Swiss-Prot;Acc:P24636] 0.03 Orthogroups_2024-Update
Brara.K01811.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00001574-RA No alias (q76fs3|tbb6_orysa : 424.0) Tubulin beta-6 chain (Beta-6... 0.02 Orthogroups_2024-Update
Potri.001G272800 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
Pp1s93_158V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Solyc06g005910 No alias Tubulin beta chain (AHRD V3.3 *** M1BVE7_SOLTU) 0.03 Orthogroups_2024-Update
Solyc06g076640 No alias Tubulin beta chain (AHRD V3.3 *** M1CZM0_SOLTU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!