1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s35_38V6

Pp1s35_38V6


Description : white-brown-complex abc transporter family


Gene families : OG_42_0000830 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000830_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s35_38V6
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
A4A49_33736 No alias abc transporter g family member 8 0.03 Orthogroups_2024-Update
At5g19410 No alias ABC-2 type transporter family protein [Source:TAIR;Acc:AT5G19410] 0.03 Orthogroups_2024-Update
Bradi5g27650 No alias ABC-2 type transporter family protein 0.04 Orthogroups_2024-Update
MA_103974g0010 No alias (at2g13610 : 350.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update
Pp1s71_147V6 No alias white-brown-complex abc transporter family 0.03 Orthogroups_2024-Update
Seita.3G260100.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc05g056470 No alias ABC transporter family protein (AHRD V3.3 *** B9H498_POPTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 437 493
IPR003439 ABC_transporter-like 97 249
No external refs found!