Description : pectin methylesterase
Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Physcomitrella release: Pp1s35_88V6 | |
Cluster | HCCA clusters: Cluster_120 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
76693 | No alias | Pectin lyase-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
At1g05310 | No alias | Probable pectinesterase 8... | 0.03 | Orthogroups_2024-Update | |
LOC_Os05g44600 | No alias | pectinesterase, putative, expressed | 0.01 | Orthogroups_2024-Update | |
Pp1s3_508V6 | No alias | pectinesterase ppe8b | 0.02 | Orthogroups_2024-Update | |
Sobic.009G203200.1 | No alias | pectin methylesterase | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030599 | pectinesterase activity | IEA | InterProScan predictions |
BP | GO:0042545 | cell wall modification | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000313 | organellar ribosome | IEP | Predicted GO |
CC | GO:0005761 | mitochondrial ribosome | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0098798 | mitochondrial protein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000070 | Pectinesterase_cat | 107 | 393 |
No external refs found! |