Pp1s36_257V6

Description : atp-binding cassette

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s36_257V6
Cluster	HCCA clusters: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method
118688	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
Bradi4g28270	No alias	pleiotropic drug resistance 12	0.04	Orthogroups_2024-Update
Brara.D02216.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Cre11.g467597	No alias	pleiotropic drug resistance 10	0.01	Orthogroups_2024-Update
Glyma.08G201300	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	Orthogroups_2024-Update
Glyma.14G127800	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Kfl00616_0050	kfl00616_0050_v1.1	(at1g59870 : 1348.0) ATP binding cassette transporter....	0.03	Orthogroups_2024-Update
LOC_Os01g24010	No alias	pleiotropic drug resistance protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os01g52560	No alias	Plant PDR ABC transporter associated domain containing...	0.02	Orthogroups_2024-Update
LOC_Os12g32820	No alias	pleiotropic drug resistance protein 3, putative, expressed	0.02	Orthogroups_2024-Update
MA_10426978g0010	No alias	(at3g16340 : 369.0) pleiotropic drug resistance 1...	0.01	Orthogroups_2024-Update
MA_10430834g0020	No alias	(q7fmw4\|pdr15_orysa : 384.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
PSME_00001268-RA	No alias	(at1g59870 : 1834.0) ATP binding cassette transporter....	0.02	Orthogroups_2024-Update
PSME_00001761-RA	No alias	(q5z9s8\|pdr12_orysa : 1822.0) Pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00006563-RA	No alias	(q5z9s8\|pdr12_orysa : 1128.0) Pleiotropic drug...	0.02	Orthogroups_2024-Update
PSME_00012292-RA	No alias	(at2g29940 : 1536.0) pleiotropic drug resistance 3...	0.02	Orthogroups_2024-Update
PSME_00014724-RA	No alias	(q76cu2\|pdr1_tobac : 1860.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
Potri.010G235800	No alias	pleiotropic drug resistance 6	0.03	Orthogroups_2024-Update
Pp1s12_29V6	No alias	atp-binding cassette	0.03	Orthogroups_2024-Update
Seita.4G210500.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.5G125600.1	No alias	cuticular lipid exporter *(PEC1) & subfamily ABCG transporter	0.01	Orthogroups_2024-Update
Seita.5G221500.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.6G234600.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.9G304200.1	No alias	subfamily ABCG transporter	0.01	Orthogroups_2024-Update
Sopen05g015600	No alias	ABC-2 type transporter	0.02	Orthogroups_2024-Update
evm.model.contig_440.1	No alias	(at2g29940 : 522.0) pleiotropic drug resistance 3...	0.01	Orthogroups_2024-Update
evm.model.tig00020902.2	No alias	(at3g16340 : 221.0) pleiotropic drug resistance 1...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003684	damaged DNA binding	IEP	Predicted GO
MF	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	IEP	Predicted GO
MF	GO:0004180	carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Predicted GO
MF	GO:0004470	malic enzyme activity	IEP	Predicted GO
MF	GO:0004471	malate dehydrogenase (decarboxylating) (NAD+) activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006289	nucleotide-excision repair	IEP	Predicted GO
BP	GO:0006508	proteolysis	IEP	Predicted GO
BP	GO:0006732	coenzyme metabolic process	IEP	Predicted GO
BP	GO:0008150	biological_process	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0008238	exopeptidase activity	IEP	Predicted GO
BP	GO:0008272	sulfate transport	IEP	Predicted GO
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predicted GO
CC	GO:0009507	chloroplast	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015936	coenzyme A metabolic process	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016615	malate dehydrogenase activity	IEP	Predicted GO
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predicted GO
MF	GO:0022804	active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0070008	serine-type exopeptidase activity	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
BP	GO:0072348	sulfur compound transport	IEP	Predicted GO
BP	GO:0072521	purine-containing compound metabolic process	IEP	Predicted GO
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	194	376
IPR013525	ABC_2_trans	1226	1439
IPR013525	ABC_2_trans	530	741
IPR029481	ABC_trans_N	106	168
IPR003439	ABC_transporter-like	929	1080
IPR013581	PDR_assoc	747	810

External Links

No external refs found!

Pp1s36_257V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation