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  5. Solyc11g069970

Solyc11g069970


Description : LOW QUALITY:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT1G17620.1)


Gene families : OG_42_0002093 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g069970
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
At1g17620 No alias At1g17620/F11A6_23 [Source:UniProtKB/TrEMBL;Acc:Q9LNP3] 0.03 Orthogroups_2024-Update
Seita.3G113000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen08g018700 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!