Pp1s370_18V6


Description : contains ESTs C26808(C50114),C96913(C50114) [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0006062 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006062_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s370_18V6
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Bradi2g08280 No alias nucleotide binding;protein binding 0.02 Orthogroups_2024-Update
Solyc07g053660 No alias WD40 repeat-like protein (AHRD V3.3 *** I0Z366_COCSC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 325 360
IPR001680 WD40_repeat 61 95
IPR001680 WD40_repeat 100 136
IPR013979 TIF_beta_prop-like 223 322
IPR007287 Sof1 361 447
No external refs found!