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Pp1s370_69V6


Description : T12H20.9; UBX domain-containing protein [Arabidopsis thaliana]


Gene families : OG_42_0002540 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s370_69V6
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g30411 No alias UBX domain-containing protein, putative, expressed 0.01 Orthogroups_2024-Update
MA_901070g0010 No alias (at4g10790 : 136.0) UBX domain-containing protein;... 0.02 Orthogroups_2024-Update
Mp1g19520.1 No alias Plant UBX domain-containing protein 10 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
PSME_00042934-RA No alias (at4g10790 : 150.0) UBX domain-containing protein;... 0.02 Orthogroups_2024-Update
Seita.9G351300.1 No alias substrate-to-CDC48 bridging factor *(PUX10) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001012 UBX_dom 434 512
No external refs found!