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  5. Solyc11g070110

Solyc11g070110


Description : Clathrin interactor EPSIN 1 (AHRD V3.3 *** A0A0B2QBN6_GLYSO)


Gene families : OG_42_0001664 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001664_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g070110
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G362400 No alias ENTH/VHS family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
CC GO:0000784 nuclear chromosome, telomeric region IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006023 aminoglycan biosynthetic process IEP Predicted GO
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predicted GO
BP GO:0006029 proteoglycan metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009100 glycoprotein metabolic process IEP Predicted GO
BP GO:0009101 glycoprotein biosynthetic process IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
BP GO:0015012 heparan sulfate proteoglycan biosynthetic process IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
BP GO:0030166 proteoglycan biosynthetic process IEP Predicted GO
BP GO:0030201 heparan sulfate proteoglycan metabolic process IEP Predicted GO
BP GO:0030203 glycosaminoglycan metabolic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0042162 telomeric DNA binding IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0043047 single-stranded telomeric DNA binding IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
MF GO:0098847 sequence-specific single stranded DNA binding IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013809 ENTH 27 161
No external refs found!