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  5. Pp1s385_14V6

Pp1s385_14V6


Description : pectate lyase


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s385_14V6
Cluster HCCA clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
Sobic.003G322800.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005680 anaphase-promoting complex IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0070403 NAD+ binding IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002022 Pec_lyase 236 397
No external refs found!