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  5. Pp1s38_127V6

Pp1s38_127V6


Description : zinc ion binding


Gene families : OG_42_0000650 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s38_127V6
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
A4A49_09747 No alias protein da1-related 1 0.02 Orthogroups_2024-Update
A4A49_11192 No alias protein da1-related 2 0.02 Orthogroups_2024-Update
At4g36860 No alias LIM domain-containing protein [Source:TAIR;Acc:AT4G36860] 0.02 Orthogroups_2024-Update
At5g66610 No alias DA1-related protein 7 [Source:UniProtKB/TrEMBL;Acc:F4K0N7] 0.03 Orthogroups_2024-Update
Bradi5g01160 No alias DA1 0.02 Orthogroups_2024-Update
Brara.I00895.1 No alias ubiquitin-dependent protease *(DA1) 0.03 Orthogroups_2024-Update
GRMZM2G017845 No alias DA1 0.03 Orthogroups_2024-Update
Glyma.17G247700 No alias DA1 0.02 Orthogroups_2024-Update
LOC_Os03g16090 No alias LIM domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g08400 No alias LIM domain-containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00000765-RA No alias (at1g19270 : 206.0) DA1 (DA1); CONTAINS InterPro... 0.02 Orthogroups_2024-Update
Seita.9G164800.1 No alias ubiquitin-dependent protease *(DA1) 0.02 Orthogroups_2024-Update
Seita.9G459200.1 No alias ubiquitin-dependent protease *(DA1) 0.02 Orthogroups_2024-Update
Sobic.008G152600.1 No alias ubiquitin-dependent protease *(DA1) 0.02 Orthogroups_2024-Update
evm.model.contig_3508.1 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022087 DA1-like 351 541
IPR001781 Znf_LIM 200 255
No external refs found!