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  5. Solyc11g071760

Solyc11g071760


Description : regulator of gene silencing AY642285


Gene families : OG_42_0001705 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001705_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc11g071760
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
A4A49_09949 No alias calcium-binding protein cml37 0.03 Orthogroups_2024-Update
A4A49_09950 No alias calcium-binding protein cml37 0.07 Orthogroups_2024-Update
A4A49_12965 No alias calcium-binding protein cml38 0.04 Orthogroups_2024-Update
Brara.B02276.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
Brara.G03460.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
GRMZM2G340313 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
Glyma.04G136200 No alias calmodulin-like 41 0.02 Orthogroups_2024-Update
Potri.002G001400 No alias calmodulin like 37 0.04 Orthogroups_2024-Update
Potri.005G259900 No alias calmodulin-like 38 0.05 Orthogroups_2024-Update
Potri.T115000 No alias calmodulin-like 38 0.03 Orthogroups_2024-Update
Seita.5G456800.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
Seita.9G333800.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sobic.003G430400.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sopen11g029420 No alias EF-hand domain pair 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 77 126
IPR002048 EF_hand_dom 149 197
No external refs found!