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  5. Pp1s38_257V6

Pp1s38_257V6


Description : ap2 erf domain-containing transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s38_257V6
Cluster HCCA clusters: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
A4A49_20472 No alias ethylene-responsive transcription factor 13 0.02 Orthogroups_2024-Update
At1g22190 No alias Ethylene-responsive transcription factor RAP2-13... 0.02 Orthogroups_2024-Update
At1g22985 No alias CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874] 0.02 Orthogroups_2024-Update
At1g53910 No alias Ethylene-responsive transcription factor RAP2-12... 0.04 Orthogroups_2024-Update
At3g16770 No alias Ethylene-responsive transcription factor RAP2-3... 0.03 Orthogroups_2024-Update
At4g34410 No alias Ethylene-responsive transcription factor ERF109... 0.02 Orthogroups_2024-Update
At5g43410 No alias Ethylene-responsive transcription factor ERF096... 0.03 Orthogroups_2024-Update
Bradi3g60120 No alias related to AP2 12 0.02 Orthogroups_2024-Update
Bradi5g17480 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
Brara.F03559.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.J02528.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Cre07.g353500 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G003466 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G016434 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G057386 No alias ethylene responsive element binding factor 5 0.03 Orthogroups_2024-Update
GRMZM2G066158 No alias ERF domain protein 12 0.02 Orthogroups_2024-Update
GRMZM2G369472 No alias ethylene-responsive element binding protein 0.02 Orthogroups_2024-Update
Glyma.01G074200 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.01G147600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G112700 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.04G062900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G214400 No alias cytokinin response factor 2 0.02 Orthogroups_2024-Update
Glyma.07G025800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G118900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G036500 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
Glyma.11G053600 No alias DREB and EAR motif protein 2 0.02 Orthogroups_2024-Update
Glyma.16G147500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G145400 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
LOC_Os04g48350 No alias dehydration-responsive element-binding protein,... 0.03 Orthogroups_2024-Update
LOC_Os04g55520 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00022516-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00022946-RA No alias (at5g61890 : 105.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
Potri.001G154200 No alias ethylene responsive element binding factor 5 0.03 Orthogroups_2024-Update
Potri.005G168700 No alias related to AP2 4 0.02 Orthogroups_2024-Update
Potri.006G238600 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G183700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.013G158500 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Seita.1G044700.1 No alias cutin and suberin biosynthesis transcription factor... 0.03 Orthogroups_2024-Update
Seita.1G248300.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Seita.1G330800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G289200.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Seita.4G252600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G080300.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Seita.9G516500.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G058200.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G148600.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Sobic.003G442100.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G227400.2 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.004G283300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G296900.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G170100.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sopen05g008450 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen08g004160 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen12g022660 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 326 377
No external refs found!