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Pp1s390_2V6


Description : wd40 repeat-containing protein


Gene families : OG_42_0006194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s390_2V6
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00000663.18 No alias (at1g10580 : 188.0) Transducin/WD40 repeat-like... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 426 462
IPR001680 WD40_repeat 298 334
IPR001680 WD40_repeat 339 377
IPR001680 WD40_repeat 559 596
IPR001680 WD40_repeat 518 553
No external refs found!