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  5. Pp1s392_20V6

Pp1s392_20V6


Description : methyl binding domain


Gene families : OG_42_0002337 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002337_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s392_20V6
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
MA_75004g0010 No alias (at1g15340 : 85.5) Protein containing methyl-CpG-binding... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 29 88
No external refs found!