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  5. Pp1s392_2V6

Pp1s392_2V6


Description : zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s392_2V6
Cluster HCCA clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_13356 No alias cyclic dof factor 3 0.03 Orthogroups_2024-Update
At1g29160 No alias Uncharacterized protein At1g29160 (Fragment)... 0.03 Orthogroups_2024-Update
Brara.C03825.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.C04315.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Glyma.03G258800 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G119160.3 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_74014g0010 No alias (at5g65590 : 133.0) Dof-type zinc finger DNA-binding... 0.03 Orthogroups_2024-Update
Potri.007G058200 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Pp1s199_87V6 No alias cycling dof factor 2 0.04 Orthogroups_2024-Update
Sobic.003G253200.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.03 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.02 Orthogroups_2024-Update
Solyc06g062520 No alias Dof zinc finger protein (AHRD V3.3 *** W9QMS6_9ROSA) 0.02 Orthogroups_2024-Update
Solyc10g086440 No alias Dof zinc finger protein (AHRD V3.3 *** W9S882_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g016410 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen05g003730 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 150 205
No external refs found!