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Description : ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** K4B103_SOLLC)
Gene families : OG_42_0002113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002113_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc01g099690 | |
| Cluster | HCCA clusters: Cluster_182 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.A01840.1 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.05 | Orthogroups_2024-Update | |
| Brara.H02844.1 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.04 | Orthogroups_2024-Update | |
| Cre07.g331500 | No alias | ATP-dependent caseinolytic (Clp) protease/crotonase... | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G375000.2 | No alias | non-proteolytic core component *(ClpR) of chloroplast... | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00020952.49 | No alias | (at4g17040 : 138.0) CLP protease R subunit 4 (CLPR4);... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Predicted GO |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0006023 | aminoglycan biosynthetic process | IEP | Predicted GO |
| BP | GO:0006024 | glycosaminoglycan biosynthetic process | IEP | Predicted GO |
| BP | GO:0006029 | proteoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
| MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
| BP | GO:0009100 | glycoprotein metabolic process | IEP | Predicted GO |
| BP | GO:0009101 | glycoprotein biosynthetic process | IEP | Predicted GO |
| BP | GO:0015012 | heparan sulfate proteoglycan biosynthetic process | IEP | Predicted GO |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
| MF | GO:0016874 | ligase activity | IEP | Predicted GO |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Predicted GO |
| BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
| BP | GO:0030166 | proteoglycan biosynthetic process | IEP | Predicted GO |
| BP | GO:0030201 | heparan sulfate proteoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0030203 | glycosaminoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
| BP | GO:0043038 | amino acid activation | IEP | Predicted GO |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Predicted GO |
| BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 114 | 295 |
| No external refs found! |