Solyc11g072400

Description : Defects in morphology protein 1 (AHRD V3.3 *** G7JQI6_MEDTR)

Gene families : OG_42_0008205 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008205_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc11g072400
Cluster	HCCA clusters: Cluster_98

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0004529	exodeoxyribonuclease activity	None	Extended
MF	GO:0004536	deoxyribonuclease activity	None	Extended
MF	GO:0008297	single-stranded DNA exodeoxyribonuclease activity	None	Extended
MF	GO:0008409	5'-3' exonuclease activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	None	Extended
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	None	Extended
MF	GO:0035312	5'-3' exodeoxyribonuclease activity	None	Extended
MF	GO:0045145	single-stranded DNA 5'-3' exodeoxyribonuclease activity	IEA	InterProScan predictions
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Predicted GO
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predicted GO
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR019190	EXOV	273	340
IPR019190	EXOV	150	267
IPR019190	EXOV	362	431

External Links

No external refs found!