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  5. Pp1s3_334V6

Pp1s3_334V6


Description : triosephosphate isomerase


Gene families : OG_42_0001246 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s3_334V6
Cluster HCCA clusters: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
Glyma.13G336200 No alias triosephosphate isomerase 0.02 Orthogroups_2024-Update
evm.model.tig00001600.10 No alias (p46225|tpic_secce : 277.0) Triosephosphate isomerase,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000652 Triosephosphate_isomerase 7 245
No external refs found!