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  5. Pp1s3_508V6

Pp1s3_508V6


Description : pectinesterase ppe8b


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s3_508V6
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
76693 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.F02821.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
GRMZM2G070913 No alias pectinesterase 11 0.02 Orthogroups_2024-Update
HORVU2Hr1G032220.4 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
LOC_Os05g44600 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g01170.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
PSME_00046573-RA No alias (at5g19730 : 519.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Potri.001G364200 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G017700 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s112_177V6 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Pp1s175_19V6 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Pp1s215_36V6 No alias pectin methylesterase 0.04 Orthogroups_2024-Update
Pp1s35_88V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s461_15V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Sobic.005G217101.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc12g008530 No alias Pectinesterase (AHRD V3.3 *** K4DBU1_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g030950 No alias Pectinesterase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 90 379
No external refs found!